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The Chain: Protein Engineering Podcast

The Chain: Protein Engineering Podcast

Written by: Cambridge Healthtech Institute
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The Chain explores the lives, careers, research, and discoveries of protein engineers and scientists, the impact their work is having on the field, and where the industry is headed. Tune in to stay up-to-date on the newest advancements and to hear the stories that are impacting the world of biologics.© 2023 The Chain: Protein Engineering Podcast Biological Sciences Science
Episodes
  • Episode: 85 - Daniel Chen on Building Multi-Target Drugs with Logic Gating
    May 12 2026

    May 12, 2026 | When it comes to drug discovery, either you find a rare, clean target and everything clicks, or you spend a decade chasing biology that refuses to cooperate. Daniel Chen, M.D., Ph.D., founder and CEO of Synthetic Design Lab, makes the case for a different playbook: objective-driven protein engineering, where we start with the outcome and design biologics that can execute it with built-in logic. With host Andrew Bradbury, Chen unpacks the SYNTHBODY platform and what “multi-tier logic gating” means in real drug design. They dive into logic-gated antibody drug conjugates, where target summation can boost binding, internalization, trafficking, and payload delivery and where an additional AND gate can trigger multiplier functions that go beyond cytotoxic payloads.

    Links from this episode:
    Specifica
    Synthetic Design Lab


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    47 mins
  • Episode: 84 - Martin Pacesa on BindCraft: An Automated Pipeline for De Novo Protein Binder Design
    Apr 15 2026

    How is BindCraft, the automated pipeline for de novo protein binder design, changing the protein design industry? Martin Pacesa, assistant professor of pharmacology at the University of Zurich, joins The Chain to discuss how BindCraft is helping non-protein designers learn how to design proteins—and how the role of the protein designer will evolve. With host Chris Bahl, their conversation explores how BindCraft may help with drug development, its role in the democratization of tools and resources, and how to work more collaboratively with AI models. Pacesa will also be speaking at May’s PEGS Summit in Boston.

    Links from this episode:

    AI Proteins

    UZH - Institute of Pharmacology and Toxicology

    University of Zurich

    Models & Molecules Podcast

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    39 mins
  • Episode: 83 - Patrick Baeuerle and Jeffrey Miller on the Prospects of Immune Cell Engagement
    Mar 17 2026

    Immune cell engagement is gaining traction, but what makes it different from other therapies? Patrick Baeuerle, Ph.D., chief scientific advisor at Cullinan Therapeutics, and Jeffrey Miller, M.D., deputy director of Masonic Cancer Center, join The Chain to discuss the advantages—and disadvantages—of immune cell engagers and how they compare to CAR T cells. Hosted by Laszlo Radvanyi, Ph.D., their conversation covers engineering recognition of multiple targets, what NK receptor is optimal to target, prospects for peptide MHC engagers and NK cells, and the future of the immune cell engagement field.

    Links from this episode:
    University of Toronto, Department of Immunology
    University of Toronto
    Cullinan Therapeutics
    Masonic Cancer Center

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    59 mins
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